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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839855.1_cds_XP_016507423.1_20546
CDS Infomation

[gene=LOC107825102] [db_xref=GeneID:107825102] [protein=GDT1-like protein 1, chloroplastic] [protein_id=XP_016507423.1] [location=complement(join(4964..5035,6151..6198,6686..6756,7213..7342,7930..8004,8097..8148,8471..8539,9103..9164,9329..9382,10105..10395,10775..10832,12021..12127))] [gbkey=CDS]
Sequence

ATGCAAAGCCTAGCGCTCTCTTCTGAGAGCAGCTCTTTGTTTAGGTCCTCTGCTACTTTT
CCACCTTCTTTTGCTTTCCCTAATATTTCCCCTCTTGCATTCTCCACGTTTTCTAGGCGG
CATTCCCTTTGCATGCACCATGGATGGTTTGGGGACTTGCCAAAGGTGGTCAGGACTAGG
AATTACAAAAGCTGCTACATTGCAAGGTCGGCTTGTTGTTCCAAAGAATGCAGTAGTTCA
AACAGATCAGCATTGTCGAAGAGGAAAAACGAAAACATTGCTGTTCTTCAAGTTTTAGAC
ATGCCACAGATCAATTATCTGAAATCTGTTGTCATTTCTGGCCTTTTCACTCTTCTGTTC
ACACAACAAGCAAGTGCTGTTTCAGAGGTTGCGACTAGCTTGCAGTCGTTTCCTTTCTTC
GGGGATCTCGGAGATTTAAGCACAGGTTTTGCTTCAGCATTCTTGTTGATATTTTTTTCA
GAGCTTGGAGACAAAACCTTCTTTATTGCTGCTCTTTTAGCAGCTAGGAACTCTGCTGCT
GTCACTTTCTTAGGGACTTTTGGCGCACTTGGGGTAATGACAATCATATCTGTTGTTCTT
GGAAGAACTTTCCACTATGTCGATGACATTCTTCCTTTCAGGTTCGGTGAAAATGATTTG
CCAGTGGATGATATTGCTGCAGTTTGCCTTCTGGTGTATTTTGGAGTGTCAACCTTGCTT
GATGCCTCCTCCAGTGATGGCATGAAAGCCGAAGAGGAACAGAAAGAGGCGGAGCTGGCA
GTTTCAGAATTTTCAGGAAATGGTGCTGGAATATTGGCTGCTGCAAACACTATCGTTAGC
ACATTTGCATTGGTCTTTGTTGCTGAATGGGGAGACAAATCATTTTTTTCTACAATAGCT
CTTGCTGCTGCATCTTCACCTCTTGGAGTCATTGGTGGCGCATTAGCCGGTCATGGAGTT
GCAACGTTGTTGGCTGTTCTAGGAGGTTCATTACTGGGTTCATTCTTGTCTGAGAAGGCC
ATTGCCTACATAGGTGGTACTCTCTTCTTAGTATTTGCAGCAGTGACAGTTATTGAGATT
GTGAGTTGA

Peptide Sequence

PEP ID

XP_016507423.1
PEP Infomation

PREDICTED: GDT1-like protein 1, chloroplastic [Nicotiana tabacum]
Sequence

MQSLALSSESSSLFRSSATFPPSFAFPNISPLAFSTFSRRHSLCMHHGWFGDLPKVVRTR
NYKSCYIARSACCSKECSSSNRSALSKRKNENIAVLQVLDMPQINYLKSVVISGLFTLLF
TQQASAVSEVATSLQSFPFFGDLGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAA
VTFLGTFGALGVMTIISVVLGRTFHYVDDILPFRFGENDLPVDDIAAVCLLVYFGVSTLL
DASSSDGMKAEEEQKEAELAVSEFSGNGAGILAAANTIVSTFALVFVAEWGDKSFFSTIA
LAAASSPLGVIGGALAGHGVATLLAVLGGSLLGSFLSEKAIAYIGGTLFLVFAAVTVIEI
VS

Transcript Sequence

Gene sequence data has not been registered.